Welcome to IPTK’s documentation!

Analyzing, Visualizing, Comparing and Integrating Immunopeptidomics data!

Introduction:

IPTK is a Python library specialized in the analysis of HLA-peptidomes identified through an immunopeptidomic(IP) pipeline. The library provides a high level API for analyzing and visualizing the identified peptides, integrating transcriptomics and protein structure information for a rich analysis of the identified immunopeptidomes. It also provides a toolbox for integrating and comparing different experiments and/or different mass-spectrometry runs.

Installation:

The library can be installed using

` pip install iptkl --user `

Funding:

The project was funded by the German Research Foundation (DFG) (Research Training Group 1743, ‘Genes, Environment and Inflammation’).

Guide

• License
• Contact
• Get Started!
• IPTK
  • IPTK package
    • Subpackages
      • IPTK.Analysis package
      • IPTK.Classes package
      • IPTK.IO package
      • IPTK.Utils package
      • IPTK.Visualization package
    • Module contents

Indices and tables

• Index

• Module Index

• Search Page